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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2136781 chr8:112828273 C/A KRT14 chr17:39738531-39743173:- 1.14 7.63 4.9E-10 Box Plot
ACC rs2136781 chr8:112828273 C/A KRT6C chr12:52862300-52867569:- 0.82 11.71 3.41E-16 Box Plot
ACC rs2146645 chr13:104877036 A/G PRHOXNB chr13:28552243-28562774:- 0.56 7.93 1.63E-10 Box Plot
ACC rs2171964 chr1:218325251 A/G DSCR8 chr21:39493545-39560110:+ 0.85 7.61 5.34E-10 Box Plot
ACC rs2191376 chr17:39335847 G/A OR5V1 chr6:29323007-29399744:- -0.59 -7.88 1.95E-10 Box Plot
ACC rs2195306 chr6:13554535 G/A PRHOXNB chr13:28552243-28562774:- 0.53 7.7 3.81E-10 Box Plot
ACC rs2230098 chr14:58830978 A/G CAND1 chr12:67663061-67713731:+ 1.25 7.51 7.49E-10 Box Plot
ACC rs2243742 chr9:96526402 C/G PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs2245502 chr6:52130963 T/C OR6C3 chr12:55725485-55726420:+ 0.9 7.64 4.7E-10 Box Plot
ACC rs2253453 chr9:96537881 A/G PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs2253598 chr9:96536427 T/A PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs2253599 chr9:96536391 C/A PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs2256558 chr9:96527258 G/A PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs2263355 chr9:96530159 C/G PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs2265563 chr9:96518269 T/C PLEKHA7 chr11:16798864-17035990:- -1.11 -7.56 6.27E-10 Box Plot